FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15507831
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT59100.014.13044558
AACACTA60550.013.5545747
CACTATA65650.012.8302499
CAAACAC94800.09.64495855
AAACACT92650.09.1692066
CCAAACA109750.07.87226874
ACCAAAC115350.07.80239963
GCCCTTA74400.07.16113664
TAGCCCT69650.06.93122962
TACCAAA176700.05.3826232
TATTTAG89450.05.2313889
CCACTCA49701.6370905E-115.2147099
ATACCAA208300.05.01784851
Produced by FastQC (version 0.11.5)