FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13600803
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTATA49600.08.7089699
ACACTAT51400.08.404118
AACACTA49800.08.3849837
GAGCACA109550.06.04606259
GCCCTTA59450.05.57493974
AGAGCAC117100.05.47188148
AAACACT80350.05.4657226
TAGCCCT61200.05.29920052
Produced by FastQC (version 0.11.5)