FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16636516
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT43600.013.3063811
TAACCCC44450.013.1158639
GTGAGTA49600.011.1836392
ATAACCC91000.06.64397578
GTATAAC112350.05.76581766
GAGTATA113200.05.5317724
TATAACC129850.05.32132057
TGAGTAT124900.05.1910373
GTCTCAT60150.05.0637251
Produced by FastQC (version 0.11.5)