FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15465677
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA158250.010.734969
AGAGCAC164000.010.40220458
GATCGGA183200.09.736551
TCGGAAG230800.07.67828663
AAGAGCA242950.07.31845057
ATCGGAA259600.07.15975672
GAAGAGC294000.06.12113246
GGAAGAG305250.06.06061275
CGGAAGA356800.05.39077764
Produced by FastQC (version 0.11.5)