FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14569421
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGTAG128200.06.5193811
GGTGTGT62000.06.44714641
GGTGTTA65500.05.5478571
GGTGTAC89200.05.54039341
GTGTGTC56150.05.38476942
GGTGTGG123800.05.2247551
GGTGTAT97250.05.08177951
GGTGTTC161850.05.02923351