FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16784008
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA117500.014.9974841
ATCGGAA183150.010.0303842
GAGCACA179800.09.9285659
TCGGAAG188600.09.74012853
AGAGCAC200150.09.1707318
AAGAGCA300450.06.49287567
CGGAAGA306700.06.15394644
GGAAGAG322400.05.9391825
CAGTCAC74500.05.103532325-29
Produced by FastQC (version 0.11.5)