FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16784008
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA119550.014.0893831
ATCGGAA182200.09.7678292
TCGGAAG189250.09.5548213
AGAGCGT252800.07.43247758
TAGATCT54150.06.913295340-44
CGGAAGA320000.06.03350354
AAGAGCG342200.05.7221317
GGAAGAG335350.05.60276035
GAGCGTC392650.05.26194679
GTAGATC75600.05.085102640-44
Produced by FastQC (version 0.11.5)