FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17153417
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGACC32000.012.37017257
TAGACCC37150.010.8489058
GTTAGAC38300.09.5835316
AGACCCC58800.07.71120839
TAGTTAG57800.07.4711544
AGTTAGA71750.06.11772445
CAACACT89550.05.7062328
AACACTA90800.05.54844679
GTAGTTA92900.05.11447953
Produced by FastQC (version 0.11.5)