FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15746487
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA45400.015.8662397
CACTATA55900.013.5226919
ACACTAT55500.013.4980248
ACCAAAC91750.08.8708723
AAACACT93450.08.47897156
CCAAACA108100.07.32992554
CAAACAC115700.07.0974335
TACCAAA134800.05.9847622
ATACCAA156850.05.42686751
Produced by FastQC (version 0.11.5)