FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16585857
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA183350.07.9697379
AGAGCAC182200.07.7829018
GATCGGA192500.07.4909131
TCGGAAG227150.06.62771273
ATCGGAA260900.05.881182
AAGAGCA258800.05.7577567
GGTTAAA59550.05.2588041
Produced by FastQC (version 0.11.5)