FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16585857
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA193550.07.30325371
AGAGCGT227200.06.49558168
TCGGAAG226400.06.4907683
GAGCGTC258300.05.88072069
ATCGGAA258900.05.81591652
AAGAGCG264200.05.50416047
TAGCGTG52000.05.261148535-39
TACGTAG22755.8001344E-45.1509911
Produced by FastQC (version 0.11.5)