FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11032135
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGTTAG14350.06.522559630-34
GATCGGA89400.06.36785941
AGTTAGC16450.06.127565435-39
CGAGTTA15950.06.04882130-34
GAGCACA94100.05.8915149
GTTAGCA19150.05.489210635-39
TCGGAAG101400.05.469953
AGAGCAC104100.05.18728738
Produced by FastQC (version 0.11.5)