FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187422

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187422
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12766082
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT54800.06.4396434
AGTGGTA55200.06.00091365
GGGGGGG59800.05.90155843
TTTTTTT443400.05.31068665
TAGTCTC20600.0010784365.24448252
GTGGTAT84000.05.05793246
Produced by FastQC (version 0.11.5)