FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14356585
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG17655.12955E-108.5713412
CACACGT125150.06.0059843140-144
AGAGCAC184550.05.687979140-144
TAGATCG86400.05.6830983140-144
GATCGGA245150.05.6152687140-144
ACGTCTG126800.05.519015140-144
AGATCGG263600.05.4516716140-144
CACGTCT135250.05.4403663140-144
ACACGTC135400.05.43434140-144
GCACACG155850.05.3957343140-144
AGCACAC167400.05.3331127140-144
CGTCTGA134150.05.1736956140-144
GAGCACA190450.05.171537140-144
Produced by FastQC (version 0.11.5)