FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13826792
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTG35400.08.13582
ACTAATG18005.68798E-98.0734771
CGTGAGT35350.07.81083251
CTAGATC10050.06.590774140-144
CTAATGC25051.6762679E-55.46121642
CCACTGT59200.05.40050171
TGAGTGC60550.05.23092373
CACTGTG68100.05.0750192
Produced by FastQC (version 0.11.5)