FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13579998
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTTG70900.017.1618149
CTGAGTT44250.013.0165128
TCTGAGT34550.010.211027
GTGAGTT64650.08.4637538
TAGTGAG23504.0017767E-117.65937336
AGTGAGT33052.1991582E-95.88184267
CGTGAGT41151.2732926E-115.77384577
CTCTGAG30901.1303746E-75.5920876
TGTGTAG40351.4115358E-95.35418222
TGTGAGT33455.8529804E-75.16578347
TGTCTCG47004.984031E-105.0562852
Produced by FastQC (version 0.11.5)