FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11763037
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA88150.013.7195879
AGAGCAC88500.013.5839888
GATCGGA99500.012.7763681
CGATTTA65750.012.0434526
TTTACCC93900.08.8162999
GGGGGGT18600.08.59199735-39
TCGGAAG154000.08.3231233
CTAATCG20650.08.16304185-89
AAGAGCA162350.07.80394947
GATTTAC112500.07.1667067
ATCGGAA186600.06.9780162
ATTTACC127950.06.9764668
GAAGAGC200800.06.4530186
GGAAGAG210650.05.94623235
TCTAATC30400.05.876710485-89
GCCGATT149000.05.84661964
TGGGGGG30650.05.730776330-34
GCGCCGA160350.05.45867822
AGCGCCG170100.05.4548231
CCGATTT178850.05.1117415
Produced by FastQC (version 0.11.5)