FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13766258
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA106750.08.2934149
AGAGCAC111300.08.2779658
GATCGGA119350.08.097961
CCACTCA48250.07.30962139
TCGGAAG151500.05.8918613
ATCGGAA199350.05.1298532
Produced by FastQC (version 0.11.5)