FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12159050
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT22400.08.7187321
TAGCATA43100.07.8531538
TTAGCAT44050.07.68378937
GTGAGTA28805.7843863E-106.50015932
TAACCCC32653.8198777E-116.396449
TTTAGCA61550.06.31813966
CTTTAGC54950.06.02856065
TCTTTAG55300.05.5985524
GTCTCTT55400.05.4837431
Produced by FastQC (version 0.11.5)