FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14906296
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA45100.011.9722079
GCCACTC69200.08.2188398
AGCCACT85450.07.2456257
ACGTTAA31050.07.18769364
AAGCCAC97550.06.42068676
TACGTTA41756.0936145E-105.34615233
Produced by FastQC (version 0.11.5)