FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14121054
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCTAAT24500.011.75468355
ATGCTAA25900.010.0073654
GCTAATT27300.09.757866
GATGCTA29250.09.6127283
CTAATTC29450.08.8010147
CACTGTA38400.06.758953
TGAATTC113200.05.21534357
ACTGTAA51157.2759576E-125.20802554
AGCACTG65950.05.13796331
AGTCTGA47556.657501E-105.0034713
Produced by FastQC (version 0.11.5)