FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11262027
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT62800.07.038486515-19
CAGTCAC66950.06.3027830-34
CCAGTCA74750.06.12676230-34
ACGTCTG85300.05.620699420-24
CACGTCT72950.05.407797320-24
TCGTATG72700.05.32740550-54
CTCGTAT63600.05.31996350-54
CGTCTGA97350.05.235551420-24
Produced by FastQC (version 0.11.5)