FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12530583
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTAG5855.5442797E-96.1535710-14
CTAGCCT5554.7928916E-75.707587740-44
GACTAGC6351.9941399E-75.442023340-44
Produced by FastQC (version 0.11.5)