FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14755885
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGA9702.0208972E-911.8878381
TGAGAGG60500.010.1175782
CTAGAAC13152.3212124E-89.30971053
CTGAGAG66000.09.1725471
GAGAGGC80900.07.1212213
CTGGTCT87700.06.97809129
TCTAGAA17251.3607903E-56.67949872
AGAGGCT100950.06.41923054
AGGCTGG107300.06.2402296