FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17891949
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCAC290000.09.6057978
GAGCACA290850.09.5779119
GATCGGA331600.08.9372991
TCGGAAG358350.08.0806713
ATCGGAA404550.07.28281642
AAGAGCA427050.06.87740957
GAAGAGC486250.06.33618166
GGAAGAG478300.06.3210965
CGGAAGA500750.05.94097764
GTTAGTC27101.869992E-65.57789668
AGTCACT118900.05.172435325-29
Produced by FastQC (version 0.11.5)