FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15425182
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA42350.011.8993927
CACTATA47100.011.1578919
ACACTAT51850.010.41340358
AAACACT86450.06.4954586
ACCAAAC96350.05.6082733
GCCCTTA60600.05.46459964
TATTTAG58550.05.4101089
CAAACAC111950.05.40167335
CCAAACA105100.05.2057584
Produced by FastQC (version 0.11.5)