Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005187749 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11404337 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCTAGA | 1235 | 0.0 | 20.404858 | 1 |
CTAGAAC | 1275 | 0.0 | 19.2 | 3 |
TCTAGAA | 1830 | 0.0 | 13.770492 | 2 |
TAGAACC | 4105 | 1.0913936E-11 | 5.7880635 | 4 |
AGCTAGG | 585 | 2.2119093E-7 | 5.6615386 | 135-139 |
CTAGGTC | 525 | 6.285769E-6 | 5.485714 | 135-139 |
CTAGCTA | 760 | 1.0237272E-8 | 5.3052626 | 130-134 |
GAGCACA | 13175 | 0.0 | 5.2462997 | 9 |