FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11404337
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGA12350.020.4048581
CTAGAAC12750.019.23
TCTAGAA18300.013.7704922
TAGAACC41051.0913936E-115.78806354
AGCTAGG5852.2119093E-75.6615386135-139
CTAGGTC5256.285769E-65.485714135-139
CTAGCTA7601.0237272E-85.3052626130-134
GAGCACA131750.05.24629979