FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11296769
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTG26450.09.5358991
TGAGTGA32100.07.62988762
GAGTGAT34100.06.75977373
AGTGATG45102.910383E-115.42765244
Produced by FastQC (version 0.11.5)