FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12733487
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA98750.012.5044771
TCGGAAG155600.07.95698263
AGAGCAC154700.07.9541828
GAGCACA164450.07.57010569
ATCGGAA198800.06.9160292
GATCTAC41450.06.3085811
GGTACAC51550.05.77708671
CGGAAGA232050.05.64396954
GGTTAGG37804.09691E-85.1883071
GGTACGT38506.244227E-85.0939741
GGGGGGG21300.00169382035.069342
Produced by FastQC (version 0.11.5)