FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13394539
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTGTA52700.07.1140843
AGCACTG68300.05.8058821
GCACTGT69750.05.6851862
ACTGTAA67200.05.5712414
ATGCTAA48557.2759576E-125.3386464
GATGCTA54100.05.3307583
GCTAATT38901.7902494E-85.1823256
TGAATTC118900.05.146997
Produced by FastQC (version 0.11.5)