FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12445362
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA93300.010.64839
AGAGCAC98400.010.3158938
GATCGGA119250.08.96042251
TGAGTCA22351.8189894E-128.403852
CACTATA32500.07.75295939
GTGAGTC23603.6379788E-117.7001211
AACACTA33100.07.17742637
AAGAGCA160450.06.64056167
ACACTAT37050.06.41222148
TCGGAAG177550.06.246423
GAAGAGC176400.06.24418356
GAGTCAG36801.3096724E-105.87089873
GGAAGAG188500.05.61416675
ATCGGAA196550.05.586672
AGTCACA39750.05.2884625-29
Produced by FastQC (version 0.11.5)