FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13765384
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA156000.015.0330051
GAGCACA160800.014.0564559
AGAGCAC160900.014.0029298
TCGGAAG188750.012.2129423
ATCGGAA216400.011.0190412
GTCTTAG29650.09.5797561
AAGAGCA248150.09.427917
GGAAGAG280500.08.4945725
CGGAAGA287350.08.3481514
GAAGAGC288300.08.1399046
AGTCACT61800.07.92324625-29
TAGCAAC43050.07.524645
GTCACTC77100.06.46300425-29
CAGTCAC78350.06.37827425-29
CTTAGCA50850.06.374983
TCTTAGC50950.06.2213062
AACACTA49950.06.1967679
CTCGTAT87300.05.871286440-44
CCAGTCA93050.05.448023325-29
TTAGCAA64300.05.3775884
Produced by FastQC (version 0.11.5)