FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13574793
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGAGTG71900.019.2264849
CTGGAGT71400.011.1930258
GCTTAGT15403.092282E-119.8800881
AGTGAGT33100.09.04807210-14
CTTAGTC17253.274181E-108.76938152
TTAGTCT22051.8189894E-128.49073
GTGAGTA39250.08.07056110-14
GGGGGGG44900.06.89859872
GAGTGAG48650.06.777559810-14
TAGTCTG29951.4224497E-96.2515434
TGAGTAC55250.05.863689410-14
Produced by FastQC (version 0.11.5)