FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16574950
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTATA38250.013.916579
AACACTA39900.012.8026127
ACACTAT42100.012.3021878
AAACACT74200.07.0825186
CCAAACA88400.06.5970944
ACCAAAC92750.06.52056553
CAAACAC104150.06.15226275
TACCAAA94400.06.02532152
ATACCAA117100.05.72326331
Produced by FastQC (version 0.11.5)