FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11842127
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCCAA52000.07.8187481
CCCTTAG19553.140849E-87.3624645
AGCCAAT53900.07.21290162
CTTAGAG23252.0027073E-97.11891177
CCTTAGA22805.178681E-76.312516
TTAGAGC27504.0520354E-75.7571558
CCCCTTA31651.8711944E-75.4585174
Produced by FastQC (version 0.11.5)