FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16580624
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCAC198400.012.4804588
GAGCACA201600.012.2469099
GATCGGA210250.012.0530831
TCGGAAG225900.011.0965993
ATCGGAA278200.09.5807392
AAGAGCA306500.08.6425437
GGAAGAG347150.07.58906275
CGGAAGA344350.07.50967654
GAAGAGC368800.07.12403736
AGTCACA78350.06.727987325-29
CAGTCAC94300.05.666375625-29
GTCACAG103950.05.445166625-29
CTCGTAT109850.05.04598640-44
Produced by FastQC (version 0.11.5)