FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12088595
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGAAC14150.025.950533
CTCTAGA17550.019.6923081
TCTAGAA25650.013.7543862
TAGAACC56850.06.4591034
ACCGGTC75800.05.5092358
AACCGGT81400.05.3071257
CCGGTCC68600.05.1428579
Produced by FastQC (version 0.11.5)