FastQCFastQC Report
Sat 11 May 2024
EGAF00005188017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16064275
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGGTGGTAATCTCGTAT7614974.740313521774247TruSeq Adapter, Index 10 (97% over 36bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTGGTGGTAATCTCGTATG574010.3573208252473268TruSeq Adapter, Index 10 (97% over 35bp)
GAAGAGCACACGTCTGAACTCCAGTCACTGGTGGTAATCTCGTATGCCGT175630.10932955268756292TruSeq Adapter, Index 10 (96% over 31bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)