FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17129754
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA30100.011.2415527
GATCTAG10408.237634E-58.3076523
ACACACT48950.07.05965476
CACTATA70350.05.32136159
AACACAC67900.05.3016115
ACACTAT65100.05.19758568
CAACACA75300.05.1632474
Produced by FastQC (version 0.11.5)