FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10772229
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC126500.05.828327140-144
CACGTCT124250.05.748437140-144
CACACGT135850.05.5861874140-144
GATCGGA208800.05.4138184140-144
GCACACG155150.05.3646393140-144
TACACGT29557.939934E-65.1536791
ACGTCTG135700.05.1148357140-144
AGATCGG235450.05.033448140-144
Produced by FastQC (version 0.11.5)