FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11777238
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGA14500.033.2689671
CTAGAAC16400.030.292683
TCTAGAA25050.019.8323362
TAGAACC49550.010.1715434
CCGGTCC66000.07.20000039
AACCGGT77900.06.5622597
ACCGGTC76950.06.08187158
GAACCGG110000.05.49818236
AGAACCG120850.05.00455145
Produced by FastQC (version 0.11.5)