FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13698118
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGGT7001.4078978E-95.75981110-114
GTCCTAG7152.3574103E-95.63879850-54
CTAGGGG6906.044502E-95.6344270-74
ACCTAGG7605.671791E-85.115561565-69
Produced by FastQC (version 0.11.5)