FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13537190
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA120400.06.2782289
CATTCAT78400.05.65750071
CCTTCAC182250.05.50582461
CCTTCAT165550.05.4463221
GGTTAAT37302.9422154E-85.26339241
AGAGCAC150200.05.2243338
CATGCAT37603.5392077E-85.22139741
CAATACC129800.05.09773831
Produced by FastQC (version 0.11.5)