FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15154696
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG37950.09.48971752
CAGTGGT58650.07.98199944
AGTGGTA61850.06.98587135
CTAAGAG20958.027546E-76.53083238
GGGGTCC25001.5025946E-55.49705841
CCCTAAG20600.00108079755.2436426
AGCAGTG88650.05.19991542
TACCCTA23752.4278743E-45.1552734
Produced by FastQC (version 0.11.5)