FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14818342
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA25050.016.0941127
ACACTAT54400.011.5134938
CACTATA61350.010.6785819
ACACACT41600.010.2104636
AACACAC55800.07.87013865
CAACACA62900.06.75286534
ACAACAC88250.06.200523
CGTTAAA71000.05.8810715
Produced by FastQC (version 0.11.5)