FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14818342
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA26300.016.971617
ACACTAT55450.011.9446498
ACACACT40450.010.8567146
CACTATA64050.010.340849
AACACAC52600.08.4858055
CAACACA62150.07.529284
ACAACAC90650.06.59161043
CGTTAAA65800.05.9081975
ATACAAC111200.05.52593561
Produced by FastQC (version 0.11.5)