FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005188284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14621075
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT40700.017.159638
CACTATA47900.015.3318759
TACACTA31050.012.0579197
AACACTA37300.08.8793177
ATACACT55100.07.57860336
CATACAC65400.06.16483645
AAACACT60850.06.15255556
TCATACA83400.05.52502354
CTATAGC34500.05.259096610-14
ACCAAAC82250.05.25209473
ACTATAG35300.05.139910710-14
ATCATAC94700.05.0938023
CCAAACA84900.05.0881954
Produced by FastQC (version 0.11.5)