FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005188979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005188979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences869764970
Sequences flagged as poor quality0
Sequence length35-150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN9005012210.35338569682796No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)