FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005189129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005189129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74798193
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG130100.07.72359645-49
ATCGGAA559950.07.65489961
TCGGAAG577350.07.3861882
CGGAAGA601550.07.03809643
CTCGTAT152450.06.695635340-44
CGTATGC155750.06.451619645-49
TCTCGTA151650.06.2911540-44
GATCGGA515500.06.2861886145
ATGCCGT172900.06.004565745-49
TCGTATG178850.05.439765540-44
GCCGTCT184350.05.43481850-54
TGCCGTC180250.05.196618645-49
AGATCGG553350.05.0308323145
Produced by FastQC (version 0.11.5)