FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005189139

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005189139
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82347579
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA416600.021.8355461
TCGGAAG438400.020.5787032
CGGAAGA470600.019.2562623
TATGCCG162800.012.73634945-49
CTCGTAT184750.011.16780340-44
CGTATGC187850.010.98391145-49
TCTCGTA180500.010.39451840-44
AGAGCAC927450.010.3804127
ATGCCGT209700.010.00537745-49
AGCACAC990900.09.9059439
GAGCACA1010750.09.6540238
TATCTCG200600.09.40358940-44
GCCGTCT217700.09.35101550-54
TCGTATG206100.09.30038240-44
TGCCGTC209200.09.16983445-49
GAAGAGC1057300.09.1193215
ATCTCGT233700.08.30747740-44
CCGTCTT271400.07.71449350-54
CGTCTTC272900.07.629585750-54
AAGAGCA1475650.06.94173346
Produced by FastQC (version 0.11.5)